Cluster: HRGMv2_4308_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4308
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4308_3 | HRGMv2_4308_3_13 | 14662 | 15708 | - | 3.A.1.2.9 |
| TC | HRGMv2_4308_3 | HRGMv2_4308_3_14 | 15753 | 16730 | - | 3.A.1.2.19 |
| TC | HRGMv2_4308_3 | HRGMv2_4308_3_15 | 16735 | 18261 | - | 3.A.1.2.13 |
| pfam | HRGMv2_4308_3 | HRGMv2_4308_3_16 | 18261 | 19019 | - | adh_short | KR | adh_short_C2 |
| pfam | HRGMv2_4308_3 | HRGMv2_4308_3_17 | 19145 | 19795 | - | PAS_6 | HTH_22 |
| CAZyme | HRGMv2_4308_3 | HRGMv2_4308_3_18 | 20121 | 21785 | + | GH18 |
Gene ID: HRGMv2_4308_3_13
Type: TC
Location: 14662 - 15708 (-)
Type: TC
Location: 14662 - 15708 (-)
Gene ID: HRGMv2_4308_3_14
Type: TC
Location: 15753 - 16730 (-)
Type: TC
Location: 15753 - 16730 (-)
Gene ID: HRGMv2_4308_3_15
Type: TC
Location: 16735 - 18261 (-)
Type: TC
Location: 16735 - 18261 (-)
Gene ID: HRGMv2_4308_3_16
Type: pfam
Location: 18261 - 19019 (-)
Type: pfam
Location: 18261 - 19019 (-)
Gene ID: HRGMv2_4308_3_17
Type: pfam
Location: 19145 - 19795 (-)
Type: pfam
Location: 19145 - 19795 (-)
Gene ID: HRGMv2_4308_3_18
Type: CAZyme
Location: 20121 - 21785 (+)
Type: CAZyme
Location: 20121 - 21785 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.