Cluster: HRGMv2_4308_CGC56
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4308
- CGC Family ID: CGCFAM_00609
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4308_211 | HRGMv2_4308_211_1 | 2 | 1225 | - | GH36 |
| NULL(UNKNOWN) | HRGMv2_4308_211 | HRGMv2_4308_211_2 | 1277 | 1441 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4308_211 | HRGMv2_4308_211_3 | 1472 | 2107 | - | 3.A.1.1.18 |
| TC | HRGMv2_4308_211 | HRGMv2_4308_211_4 | 2120 | 3028 | - | 3.A.1.1.11 |
Gene ID: HRGMv2_4308_211_1
Type: CAZyme
Location: 2 - 1225 (-)
Type: CAZyme
Location: 2 - 1225 (-)
Gene ID: HRGMv2_4308_211_2
Type:
Location: 1277 - 1441 (-)
Type:
Location: 1277 - 1441 (-)
Gene ID: HRGMv2_4308_211_3
Type: TC
Location: 1472 - 2107 (-)
Type: TC
Location: 1472 - 2107 (-)
Gene ID: HRGMv2_4308_211_4
Type: TC
Location: 2120 - 3028 (-)
Type: TC
Location: 2120 - 3028 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.