Cluster: HRGMv2_4308_CGC55
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4308
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4308_188 | HRGMv2_4308_188_1 | 18 | 407 | - | 4.A.1.2.6 |
| CAZyme | HRGMv2_4308_188 | HRGMv2_4308_188_2 | 423 | 1862 | - | GH1 |
| TC | HRGMv2_4308_188 | HRGMv2_4308_188_3 | 1878 | 3293 | - | 4.A.1.2.11 |
Gene ID: HRGMv2_4308_188_1
Type: TC
Location: 18 - 407 (-)
Type: TC
Location: 18 - 407 (-)
Gene ID: HRGMv2_4308_188_2
Type: CAZyme
Location: 423 - 1862 (-)
Type: CAZyme
Location: 423 - 1862 (-)
Gene ID: HRGMv2_4308_188_3
Type: TC
Location: 1878 - 3293 (-)
Type: TC
Location: 1878 - 3293 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.