Cluster: HRGMv2_4308_CGC54
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4308
- CGC Family ID: CGCFAM_03419
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4308_185 | HRGMv2_4308_185_2 | 1308 | 3566 | + | GH36 |
| TC | HRGMv2_4308_185 | HRGMv2_4308_185_3 | 3584 | 4474 | + | 3.A.1.1.20 |
| TC | HRGMv2_4308_185 | HRGMv2_4308_185_4 | 4478 | 5170 | + | 3.A.1.1.23 |
Gene ID: HRGMv2_4308_185_2
Type: CAZyme
Location: 1308 - 3566 (+)
Type: CAZyme
Location: 1308 - 3566 (+)
Gene ID: HRGMv2_4308_185_3
Type: TC
Location: 3584 - 4474 (+)
Type: TC
Location: 3584 - 4474 (+)
Gene ID: HRGMv2_4308_185_4
Type: TC
Location: 4478 - 5170 (+)
Type: TC
Location: 4478 - 5170 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.