Cluster: HRGMv2_4308_CGC52
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4308
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4308_157 | HRGMv2_4308_157_2 | 1044 | 3254 | - | GH73 |
| TC | HRGMv2_4308_157 | HRGMv2_4308_157_3 | 3545 | 4957 | - | 3.B.1.1.6 |
| TC | HRGMv2_4308_157 | HRGMv2_4308_157_4 | 4986 | 6137 | - | 3.B.1.1.3 |
| TC | HRGMv2_4308_157 | HRGMv2_4308_157_5 | 6179 | 6550 | - | 3.B.1.1.2 |
Gene ID: HRGMv2_4308_157_2
Type: CAZyme
Location: 1044 - 3254 (-)
Type: CAZyme
Location: 1044 - 3254 (-)
Gene ID: HRGMv2_4308_157_3
Type: TC
Location: 3545 - 4957 (-)
Type: TC
Location: 3545 - 4957 (-)
Gene ID: HRGMv2_4308_157_4
Type: TC
Location: 4986 - 6137 (-)
Type: TC
Location: 4986 - 6137 (-)
Gene ID: HRGMv2_4308_157_5
Type: TC
Location: 6179 - 6550 (-)
Type: TC
Location: 6179 - 6550 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.