Cluster: HRGMv2_4308_CGC51
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4308
- CGC Family ID: CGCFAM_01033
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4308_143 | HRGMv2_4308_143_1 | 1 | 465 | + | 3.A.1.5.29 |
| TC | HRGMv2_4308_143 | HRGMv2_4308_143_2 | 466 | 1476 | + | 3.A.1.5.20 |
| pfam | HRGMv2_4308_143 | HRGMv2_4308_143_3 | 1473 | 1928 | + | DUF386 |
| pfam | HRGMv2_4308_143 | HRGMv2_4308_143_4 | 1947 | 2909 | + | DHDPS |
| CAZyme | HRGMv2_4308_143 | HRGMv2_4308_143_5 | 3062 | 4522 | + | GH165 |
Gene ID: HRGMv2_4308_143_1
Type: TC
Location: 1 - 465 (+)
Type: TC
Location: 1 - 465 (+)
Gene ID: HRGMv2_4308_143_2
Type: TC
Location: 466 - 1476 (+)
Type: TC
Location: 466 - 1476 (+)
Gene ID: HRGMv2_4308_143_3
Type: pfam
Location: 1473 - 1928 (+)
Type: pfam
Location: 1473 - 1928 (+)
Gene ID: HRGMv2_4308_143_4
Type: pfam
Location: 1947 - 2909 (+)
Type: pfam
Location: 1947 - 2909 (+)
Gene ID: HRGMv2_4308_143_5
Type: CAZyme
Location: 3062 - 4522 (+)
Type: CAZyme
Location: 3062 - 4522 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.