Cluster: HRGMv2_4308_CGC49
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4308
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4308_129 | HRGMv2_4308_129_1 | 2 | 388 | + | 2.A.2.3.3 |
| CAZyme | HRGMv2_4308_129 | HRGMv2_4308_129_2 | 439 | 2679 | + | GH36 |
| NULL(UNKNOWN) | HRGMv2_4308_129 | HRGMv2_4308_129_3 | 2676 | 3350 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4308_129 | HRGMv2_4308_129_4 | 3352 | 3828 | + | 4.A.1.2.5 |
| TC | HRGMv2_4308_129 | HRGMv2_4308_129_5 | 3975 | 5369 | - | 2.A.66.1.32 |
Gene ID: HRGMv2_4308_129_1
Type: TC
Location: 2 - 388 (+)
Type: TC
Location: 2 - 388 (+)
Gene ID: HRGMv2_4308_129_2
Type: CAZyme
Location: 439 - 2679 (+)
Type: CAZyme
Location: 439 - 2679 (+)
Gene ID: HRGMv2_4308_129_3
Type:
Location: 2676 - 3350 (+)
Type:
Location: 2676 - 3350 (+)
Gene ID: HRGMv2_4308_129_4
Type: TC
Location: 3352 - 3828 (+)
Type: TC
Location: 3352 - 3828 (+)
Gene ID: HRGMv2_4308_129_5
Type: TC
Location: 3975 - 5369 (-)
Type: TC
Location: 3975 - 5369 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.