Cluster: HRGMv2_4308_CGC48
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4308
- CGC Family ID: CGCFAM_00659
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4308_126 | HRGMv2_4308_126_5 | 4254 | 5144 | + | 3.A.1.1.30 |
| TC | HRGMv2_4308_126 | HRGMv2_4308_126_6 | 5141 | 5968 | + | 3.A.1.1.45 |
| CAZyme | HRGMv2_4308_126 | HRGMv2_4308_126_7 | 5952 | 7412 | + | GH13_18 |
Gene ID: HRGMv2_4308_126_5
Type: TC
Location: 4254 - 5144 (+)
Type: TC
Location: 4254 - 5144 (+)
Gene ID: HRGMv2_4308_126_6
Type: TC
Location: 5141 - 5968 (+)
Type: TC
Location: 5141 - 5968 (+)
Gene ID: HRGMv2_4308_126_7
Type: CAZyme
Location: 5952 - 7412 (+)
Type: CAZyme
Location: 5952 - 7412 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.