Cluster: HRGMv2_4308_CGC47
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4308
- CGC Family ID: CGCFAM_00041
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4308_124 | HRGMv2_4308_124_1 | 70 | 1122 | - | GH105 |
| TC | HRGMv2_4308_124 | HRGMv2_4308_124_2 | 1180 | 2586 | - | 3.A.1.1.11 |
| TF | HRGMv2_4308_124 | HRGMv2_4308_124_3 | 2763 | 3590 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4308_124 | HRGMv2_4308_124_4 | 3562 | 5592 | - | GH115 |
Gene ID: HRGMv2_4308_124_1
Type: CAZyme
Location: 70 - 1122 (-)
Type: CAZyme
Location: 70 - 1122 (-)
Gene ID: HRGMv2_4308_124_2
Type: TC
Location: 1180 - 2586 (-)
Type: TC
Location: 1180 - 2586 (-)
Gene ID: HRGMv2_4308_124_3
Type: TF
Location: 2763 - 3590 (+)
Type: TF
Location: 2763 - 3590 (+)
Gene ID: HRGMv2_4308_124_4
Type: CAZyme
Location: 3562 - 5592 (-)
Type: CAZyme
Location: 3562 - 5592 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.