Cluster: HRGMv2_4308_CGC46
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4308
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4308_117 | HRGMv2_4308_117_4 | 3036 | 4805 | - | GH35 |
| CAZyme | HRGMv2_4308_117 | HRGMv2_4308_117_5 | 4824 | 5993 | - | GH88 |
| TC | HRGMv2_4308_117 | HRGMv2_4308_117_6 | 6035 | 6511 | - | 4.A.6.1.13 |
| TC | HRGMv2_4308_117 | HRGMv2_4308_117_7 | 6546 | 7343 | - | 4.A.6.1.13 |
| TC | HRGMv2_4308_117 | HRGMv2_4308_117_8 | 7336 | 8124 | - | 4.A.6.1.13 |
| TC | HRGMv2_4308_117 | HRGMv2_4308_117_9 | 8150 | 8581 | - | 4.A.6.1.10 |
Gene ID: HRGMv2_4308_117_4
Type: CAZyme
Location: 3036 - 4805 (-)
Type: CAZyme
Location: 3036 - 4805 (-)
Gene ID: HRGMv2_4308_117_5
Type: CAZyme
Location: 4824 - 5993 (-)
Type: CAZyme
Location: 4824 - 5993 (-)
Gene ID: HRGMv2_4308_117_6
Type: TC
Location: 6035 - 6511 (-)
Type: TC
Location: 6035 - 6511 (-)
Gene ID: HRGMv2_4308_117_7
Type: TC
Location: 6546 - 7343 (-)
Type: TC
Location: 6546 - 7343 (-)
Gene ID: HRGMv2_4308_117_8
Type: TC
Location: 7336 - 8124 (-)
Type: TC
Location: 7336 - 8124 (-)
Gene ID: HRGMv2_4308_117_9
Type: TC
Location: 8150 - 8581 (-)
Type: TC
Location: 8150 - 8581 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.