Cluster: HRGMv2_4308_CGC39
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4308
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4308_82 | HRGMv2_4308_82_5 | 5281 | 7179 | + | 4.A.1.2.1 |
| pfam | HRGMv2_4308_82 | HRGMv2_4308_82_6 | 7217 | 8050 | + | Lactamase_B_2 | Lactamase_B_3 |
| CAZyme | HRGMv2_4308_82 | HRGMv2_4308_82_7 | 8176 | 9588 | + | GH32 |
| CAZyme | HRGMv2_4308_82 | HRGMv2_4308_82_8 | 9609 | 11108 | + | GH32 |
Gene ID: HRGMv2_4308_82_5
Type: TC
Location: 5281 - 7179 (+)
Type: TC
Location: 5281 - 7179 (+)
Gene ID: HRGMv2_4308_82_6
Type: pfam
Location: 7217 - 8050 (+)
Type: pfam
Location: 7217 - 8050 (+)
Gene ID: HRGMv2_4308_82_7
Type: CAZyme
Location: 8176 - 9588 (+)
Type: CAZyme
Location: 8176 - 9588 (+)
Gene ID: HRGMv2_4308_82_8
Type: CAZyme
Location: 9609 - 11108 (+)
Type: CAZyme
Location: 9609 - 11108 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.