Cluster: HRGMv2_4308_CGC38
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4308
- CGC Family ID: CGCFAM_00027
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4308_80 | HRGMv2_4308_80_9 | 8789 | 9493 | - | 2.A.115.2.12 |
| CAZyme | HRGMv2_4308_80 | HRGMv2_4308_80_10 | 9490 | 10887 | - | GH1 |
| TC | HRGMv2_4308_80 | HRGMv2_4308_80_11 | 10989 | 12842 | - | 4.A.1.2.11 |
Gene ID: HRGMv2_4308_80_9
Type: TC
Location: 8789 - 9493 (-)
Type: TC
Location: 8789 - 9493 (-)
Gene ID: HRGMv2_4308_80_10
Type: CAZyme
Location: 9490 - 10887 (-)
Type: CAZyme
Location: 9490 - 10887 (-)
Gene ID: HRGMv2_4308_80_11
Type: TC
Location: 10989 - 12842 (-)
Type: TC
Location: 10989 - 12842 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.