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Cluster: HRGMv2_4308_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4308_56 HRGMv2_4308_56_3 3181 4677 + CE4
pfam HRGMv2_4308_56 HRGMv2_4308_56_4 4783 4929 + SCIFF
pfam HRGMv2_4308_56 HRGMv2_4308_56_5 5094 6494 + Radical_SAM | Fer4_12
TC HRGMv2_4308_56 HRGMv2_4308_56_6 6507 8645 + 2.A.6.4.2
pfam HRGMv2_4308_56 HRGMv2_4308_56_7 8655 9794 + TGT
pfam HRGMv2_4308_56 HRGMv2_4308_56_8 9933 10235 + YajC
CAZyme HRGMv2_4308_56 HRGMv2_4308_56_9 10441 11853 + GH3
Gene ID: HRGMv2_4308_56_3
Type: CAZyme
Location: 3181 - 4677 (+)
Gene ID: HRGMv2_4308_56_4
Type: pfam
Location: 4783 - 4929 (+)
Gene ID: HRGMv2_4308_56_5
Type: pfam
Location: 5094 - 6494 (+)
Gene ID: HRGMv2_4308_56_6
Type: TC
Location: 6507 - 8645 (+)
Gene ID: HRGMv2_4308_56_7
Type: pfam
Location: 8655 - 9794 (+)
Gene ID: HRGMv2_4308_56_8
Type: pfam
Location: 9933 - 10235 (+)
Gene ID: HRGMv2_4308_56_9
Type: CAZyme
Location: 10441 - 11853 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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