Cluster: HRGMv2_4308_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4308
- CGC Family ID: CGCFAM_00027
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4308_37 | HRGMv2_4308_37_6 | 4123 | 5466 | + | 2.A.66.1.33 |
| TC | HRGMv2_4308_37 | HRGMv2_4308_37_7 | 5489 | 6208 | + | 4.A.1.2.11 |
| TC | HRGMv2_4308_37 | HRGMv2_4308_37_8 | 6220 | 6879 | + | 4.A.1.2.3 |
| CAZyme | HRGMv2_4308_37 | HRGMv2_4308_37_9 | 6876 | 8330 | + | GH1 |
Gene ID: HRGMv2_4308_37_6
Type: TC
Location: 4123 - 5466 (+)
Type: TC
Location: 4123 - 5466 (+)
Gene ID: HRGMv2_4308_37_7
Type: TC
Location: 5489 - 6208 (+)
Type: TC
Location: 5489 - 6208 (+)
Gene ID: HRGMv2_4308_37_8
Type: TC
Location: 6220 - 6879 (+)
Type: TC
Location: 6220 - 6879 (+)
Gene ID: HRGMv2_4308_37_9
Type: CAZyme
Location: 6876 - 8330 (+)
Type: CAZyme
Location: 6876 - 8330 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.