Cluster: HRGMv2_4308_CGC26
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4308
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4308_34 | HRGMv2_4308_34_5 | 3996 | 5267 | + | 3.A.1.1.44 |
| TC | HRGMv2_4308_34 | HRGMv2_4308_34_6 | 5287 | 6168 | + | 3.A.1.1.11 |
| TC | HRGMv2_4308_34 | HRGMv2_4308_34_7 | 6183 | 7007 | + | 3.A.1.1.34 |
| CAZyme | HRGMv2_4308_34 | HRGMv2_4308_34_8 | 7111 | 9279 | + | GH36 |
Gene ID: HRGMv2_4308_34_5
Type: TC
Location: 3996 - 5267 (+)
Type: TC
Location: 3996 - 5267 (+)
Gene ID: HRGMv2_4308_34_6
Type: TC
Location: 5287 - 6168 (+)
Type: TC
Location: 5287 - 6168 (+)
Gene ID: HRGMv2_4308_34_7
Type: TC
Location: 6183 - 7007 (+)
Type: TC
Location: 6183 - 7007 (+)
Gene ID: HRGMv2_4308_34_8
Type: CAZyme
Location: 7111 - 9279 (+)
Type: CAZyme
Location: 7111 - 9279 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.