Cluster: HRGMv2_4308_CGC25
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4308
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4308_32 | HRGMv2_4308_32_6 | 6115 | 7626 | - | GH77 |
| pfam | HRGMv2_4308_32 | HRGMv2_4308_32_7 | 7623 | 8507 | - | Exo_endo_phos |
| TC | HRGMv2_4308_32 | HRGMv2_4308_32_8 | 8529 | 10880 | - | 4.A.1.1.11 |
Gene ID: HRGMv2_4308_32_6
Type: CAZyme
Location: 6115 - 7626 (-)
Type: CAZyme
Location: 6115 - 7626 (-)
Gene ID: HRGMv2_4308_32_7
Type: pfam
Location: 7623 - 8507 (-)
Type: pfam
Location: 7623 - 8507 (-)
Gene ID: HRGMv2_4308_32_8
Type: TC
Location: 8529 - 10880 (-)
Type: TC
Location: 8529 - 10880 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.