Cluster: HRGMv2_4308_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4308
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4308_1 | HRGMv2_4308_1_23 | 20910 | 22199 | + | 2.A.56.1.6 |
| pfam | HRGMv2_4308_1 | HRGMv2_4308_1_24 | 22225 | 23013 | + | HpcH_HpaI |
| CAZyme | HRGMv2_4308_1 | HRGMv2_4308_1_25 | 23180 | 25009 | - | GH13_4 |
| TC | HRGMv2_4308_1 | HRGMv2_4308_1_26 | 25203 | 26126 | - | 2.A.4.7.2 |
Gene ID: HRGMv2_4308_1_23
Type: TC
Location: 20910 - 22199 (+)
Type: TC
Location: 20910 - 22199 (+)
Gene ID: HRGMv2_4308_1_24
Type: pfam
Location: 22225 - 23013 (+)
Type: pfam
Location: 22225 - 23013 (+)
Gene ID: HRGMv2_4308_1_25
Type: CAZyme
Location: 23180 - 25009 (-)
Type: CAZyme
Location: 23180 - 25009 (-)
Gene ID: HRGMv2_4308_1_26
Type: TC
Location: 25203 - 26126 (-)
Type: TC
Location: 25203 - 26126 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.