Cluster: HRGMv2_4308_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4308
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4308_12 | HRGMv2_4308_12_4 | 3173 | 4963 | - | CBM48 | GH13_9 |
| STP | HRGMv2_4308_12 | HRGMv2_4308_12_5 | 5117 | 5650 | + | TetR_N |
| peptidase | HRGMv2_4308_12 | HRGMv2_4308_12_6 | 6039 | 6920 | - | S09.UPW |
| TC | HRGMv2_4308_12 | HRGMv2_4308_12_7 | 6939 | 8417 | - | 3.A.1.1.11 |
Gene ID: HRGMv2_4308_12_4
Type: CAZyme
Location: 3173 - 4963 (-)
Type: CAZyme
Location: 3173 - 4963 (-)
Gene ID: HRGMv2_4308_12_5
Type: STP
Location: 5117 - 5650 (+)
Type: STP
Location: 5117 - 5650 (+)
Gene ID: HRGMv2_4308_12_6
Type: peptidase
Location: 6039 - 6920 (-)
Type: peptidase
Location: 6039 - 6920 (-)
Gene ID: HRGMv2_4308_12_7
Type: TC
Location: 6939 - 8417 (-)
Type: TC
Location: 6939 - 8417 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.