Cluster: HRGMv2_4308_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4308
- CGC Family ID: CGCFAM_00027
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4308_10 | HRGMv2_4308_10_16 | 15739 | 17199 | + | 4.A.1.2.11 |
| CAZyme | HRGMv2_4308_10 | HRGMv2_4308_10_17 | 17298 | 18725 | + | GH1 |
| TC | HRGMv2_4308_10 | HRGMv2_4308_10_18 | 18859 | 19443 | - | 3.A.1.17.12 |
Gene ID: HRGMv2_4308_10_16
Type: TC
Location: 15739 - 17199 (+)
Type: TC
Location: 15739 - 17199 (+)
Gene ID: HRGMv2_4308_10_17
Type: CAZyme
Location: 17298 - 18725 (+)
Type: CAZyme
Location: 17298 - 18725 (+)
Gene ID: HRGMv2_4308_10_18
Type: TC
Location: 18859 - 19443 (-)
Type: TC
Location: 18859 - 19443 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.