Cluster: HRGMv2_4308_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4308
- CGC Family ID: CGCFAM_07724
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4308_9 | HRGMv2_4308_9_44 | 42558 | 45041 | + | GH31_15 |
| STP | HRGMv2_4308_9 | HRGMv2_4308_9_45 | 45213 | 46562 | + | SBP_bac_1 |
| TC | HRGMv2_4308_9 | HRGMv2_4308_9_46 | 46675 | 47601 | + | 3.A.1.1.41 |
| TC | HRGMv2_4308_9 | HRGMv2_4308_9_47 | 47616 | 48443 | + | 3.A.1.1.31 |
Gene ID: HRGMv2_4308_9_44
Type: CAZyme
Location: 42558 - 45041 (+)
Type: CAZyme
Location: 42558 - 45041 (+)
Gene ID: HRGMv2_4308_9_45
Type: STP
Location: 45213 - 46562 (+)
Type: STP
Location: 45213 - 46562 (+)
Gene ID: HRGMv2_4308_9_46
Type: TC
Location: 46675 - 47601 (+)
Type: TC
Location: 46675 - 47601 (+)
Gene ID: HRGMv2_4308_9_47
Type: TC
Location: 47616 - 48443 (+)
Type: TC
Location: 47616 - 48443 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.