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Cluster: HRGMv2_4308_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4308_7 HRGMv2_4308_7_7 8106 9206 - 2.A.86.1.3
STP HRGMv2_4308_7 HRGMv2_4308_7_8 9382 11937 + HATPase_c | HisKA | Response_reg | dCache_1
TC HRGMv2_4308_7 HRGMv2_4308_7_9 11990 12928 - 2.A.19.5.2
CAZyme HRGMv2_4308_7 HRGMv2_4308_7_10 13353 15557 - GH36
TC HRGMv2_4308_7 HRGMv2_4308_7_11 15590 16426 - 3.A.1.1.34
TC HRGMv2_4308_7 HRGMv2_4308_7_12 16439 17320 - 3.A.1.1.25
STP HRGMv2_4308_7 HRGMv2_4308_7_13 17333 18634 - SBP_bac_1
TF HRGMv2_4308_7 HRGMv2_4308_7_14 18930 19805 + HTH_AraC | HTH_AraC
TC HRGMv2_4308_7 HRGMv2_4308_7_15 19720 22998 - 5.A.3.3.2
TC HRGMv2_4308_7 HRGMv2_4308_7_16 23127 23777 + 1.C.113.1.3
Gene ID: HRGMv2_4308_7_7
Type: TC
Location: 8106 - 9206 (-)
Gene ID: HRGMv2_4308_7_8
Type: STP
Location: 9382 - 11937 (+)
Gene ID: HRGMv2_4308_7_9
Type: TC
Location: 11990 - 12928 (-)
Gene ID: HRGMv2_4308_7_10
Type: CAZyme
Location: 13353 - 15557 (-)
Gene ID: HRGMv2_4308_7_11
Type: TC
Location: 15590 - 16426 (-)
Gene ID: HRGMv2_4308_7_12
Type: TC
Location: 16439 - 17320 (-)
Gene ID: HRGMv2_4308_7_13
Type: STP
Location: 17333 - 18634 (-)
Gene ID: HRGMv2_4308_7_14
Type: TF
Location: 18930 - 19805 (+)
Gene ID: HRGMv2_4308_7_15
Type: TC
Location: 19720 - 22998 (-)
Gene ID: HRGMv2_4308_7_16
Type: TC
Location: 23127 - 23777 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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