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Cluster: HRGMv2_4306_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4306_13 HRGMv2_4306_13_78 95032 95805 + 3.A.1.103.1
TC HRGMv2_4306_13 HRGMv2_4306_13_79 95807 97180 + 3.A.1.103.4
pfam HRGMv2_4306_13 HRGMv2_4306_13_80 97181 98542 + Methyltransf_21
CAZyme HRGMv2_4306_13 HRGMv2_4306_13_81 98545 101094 + GT4
NULL(UNKNOWN) HRGMv2_4306_13 HRGMv2_4306_13_82 101244 103829 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4306_13 HRGMv2_4306_13_83 103855 104841 + GT2
CAZyme HRGMv2_4306_13 HRGMv2_4306_13_84 104831 105931 + GT4
TC HRGMv2_4306_13 HRGMv2_4306_13_85 105928 106884 + 9.B.102.7.10
Gene ID: HRGMv2_4306_13_78
Type: TC
Location: 95032 - 95805 (+)
Gene ID: HRGMv2_4306_13_79
Type: TC
Location: 95807 - 97180 (+)
Gene ID: HRGMv2_4306_13_80
Type: pfam
Location: 97181 - 98542 (+)
Gene ID: HRGMv2_4306_13_81
Type: CAZyme
Location: 98545 - 101094 (+)
Gene ID: HRGMv2_4306_13_82
Type:
Location: 101244 - 103829 (+)
Gene ID: HRGMv2_4306_13_83
Type: CAZyme
Location: 103855 - 104841 (+)
Gene ID: HRGMv2_4306_13_84
Type: CAZyme
Location: 104831 - 105931 (+)
Gene ID: HRGMv2_4306_13_85
Type: TC
Location: 105928 - 106884 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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