PROTEIN: HRGMv2_4306_13_82
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Protein File & Metadata
Source:
HRGMv2_4306_13_82.pdb
Genome ID:
Protein ID:
HRGMv2_4306_13_82
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Protein Sequence
MGVINKQENQ IRKKECLIVL ITALLVVLIH GLHLFSLSAP YVLDDEFGYW SIAAYFAGLD 60 FSSAVSTAFY YSYGYSLALS LFMRLSRDPV VLYRMAIAFN AMLAGGSFLI LYGIGRKLFV 120 RQKKEVLLTA VFCIALYPNA LAQSSVAWSE TLLLFVCSAV CYVFATLNEK KGVFSYTLLG 180 ALIVYAYMIH QRTLGMLIAS LCVLLYKKVK GETSWSQLTA FVVTVALLLF LHKIIKADIK 240 ANVWLGRLTL QNNDFAGQVG KIAAIFTVDG LLKTLRAFAG QVFYIGAASL FTAFFGIWFL 300 LESSFMAVLE GVRHKKKMPF LAVDSFSLFL ILAFLASVAI STIFMNEPNR LDQVVYGRYT 360 DMLMGPVMLI GIAAWKGSKK EGAILLMASA VLLVGCALLA RPMLDSLGAG KFNGICSVGL 420 WRFYYDGRFH IYRACLFFAF VGGLFYLLYF LGFRKKFLQN AAFLVMGGLF LFTGESFVNN 480 RIVPSSRENI KNKELVDYMD TMNSSLPVYF AMGEDFYTNS YRDIMQFLMP EKALQCVTYE 540 ELLQNGDEKF VVIHNANRHI FKLLEKYTVV DMGRYGSVLV TNGSETLKNI EKWKGEVFSH 600 ENRLMVPLDT LSSQNNTNLN GDFLVSSGEK GLLTFGPYMT LDRGSYRAYA SLELLSHQGE 660 AVGYMELTAG GRRLGKASLD SSEFDSEGRA LIEVPFGLSR AADRIEIRIF TEKGTVLKVE 720 EVSLSRENYR YINEIDLSKM SAQTASFDGN SLVSDGRYGF AAFGPYLYLE ADNYEAEIKI 780 RIQNMDTAPE KLLTADISAG KGDVIASRVL LKQDIIGETL TVTLPFALKK DAEDLEIRVL 840 EEEGVQIMID SIKLQNVDMD L 861
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HY61-F1-model_v4 | 11 | 585 | 1 | 549 | 0.5741 |
0.7074 |
| AF-K0EVQ0-F1-model_v4 | 8 | 585 | 1 | 552 | 0.5663 |
0.6954 |
| AF-Q32DT1-F1-model_v4 | 11 | 583 | 1 | 550 | 0.564 |
0.6947 |
| AF-O52327-F1-model_v4 | 11 | 584 | 1 | 547 | 0.5637 |
0.6959 |
| AF-K0F8A5-F1-model_v4 | 1 | 600 | 13 | 668 | 0.5631 |
0.7061 |
| AF-P76473-F1-model_v4 | 11 | 583 | 1 | 550 | 0.562 |
0.6923 |
| AF-E7F5M2-F1-model_v4 | 8 | 713 | 1 | 647 | 0.5542 |
0.6574 |
| AF-F1M7C0-F1-model_v4 | 4 | 713 | 10 | 666 | 0.5476 |
0.6491 |
| AF-Q8BMD6-F1-model_v4 | 8 | 713 | 14 | 665 | 0.546 |
0.6516 |
| AF-K0EVV4-F1-model_v4 | 8 | 726 | 24 | 653 | 0.5436 |
0.6513 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6C2YNQ2-F1-model_v4 | GT83 | 1 | 584 | 10 | 504 | 0.6143 |
0.7933 |
| AF-A0A4P6HEB7-F1-model_v4 | GT83 | 12 | 585 | 27 | 492 | 0.6048 |
0.8233 |
| A0A4V0I1M5 | GT83 | 12 | 597 | 1 | 567 | 0.6037 |
0.7351 |
| AF-G7URS4-F1-model_v4 | GT83 | 2 | 600 | 2 | 501 | 0.6003 |
0.7683 |
| AF-A0A6C2YU76-F1-model_v4 | GT83 | 11 | 634 | 3 | 584 | 0.5993 |
0.724 |
| AF-A0A1Y0HA72-F1-model_v4 | GT83 | 8 | 584 | 8 | 488 | 0.599 |
0.7798 |
| AF-A0A5C1AAJ9-F1-model_v4 | GT83 | 11 | 587 | 2 | 551 | 0.5968 |
0.7359 |
| AF-Q39X95-F1-model_v4 | GT83 | 1 | 587 | 1 | 554 | 0.5963 |
0.7322 |
| AF-C0QUD6-F1-model_v4 | GT83 | 10 | 607 | 1 | 520 | 0.5949 |
0.7481 |
| AF-H5SJR8-F1-model_v4 | GT83 | 8 | 703 | 4 | 631 | 0.5939 |
0.6981 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6C2YNQ2 | GT83 | 1 | 584 | 10 | 504 | 0.6143 |
0.7933 |
| A0A4P6HEB7 | GT83 | 12 | 585 | 27 | 492 | 0.6048 |
0.8233 |
| A0A4V0I1M5 | GT83 | 12 | 597 | 1 | 567 | 0.6037 |
0.7351 |
| E1QIE7 | GT83 | 6 | 596 | 1 | 576 | 0.6026 |
0.7343 |
| A0A6C2YU76 | GT83 | 11 | 634 | 3 | 584 | 0.5993 |
0.724 |
| A0A1Y0HA72 | GT83 | 8 | 584 | 8 | 488 | 0.599 |
0.7798 |
| A0A5C1AAJ9 | GT83 | 11 | 587 | 2 | 551 | 0.5968 |
0.7359 |
| A0A3M0CTC8 | GT83 | 11 | 600 | 18 | 577 | 0.596 |
0.741 |
| A0A2Z4Y6P6 | GT83 | 8 | 583 | 1 | 495 | 0.596 |
0.7624 |
| C0QUD6 | GT83 | 10 | 607 | 1 | 520 | 0.5949 |
0.7481 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5f15-assembly1.cif.gz_A | 11 | 598 | 1 | 541 | 0.5803 |
0.7186 |
| 5ezm-assembly1.cif.gz_A | 11 | 598 | 1 | 537 | 0.5725 |
0.711 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HY61-F1-model_v4 | 11 | 585 | 1 | 549 | 0.5741 |
0.7074 |
| AF-Q4KC80-F1-model_v4 | 11 | 585 | 1 | 549 | 0.5739 |
0.7068 |
| AF-B7VBN0-F1-model_v4 | 11 | 585 | 1 | 549 | 0.5734 |
0.7065 |
| AF-A6V1N8-F1-model_v4 | 11 | 584 | 1 | 549 | 0.5732 |
0.7064 |
| AF-Q3KCB9-F1-model_v4 | 11 | 585 | 1 | 549 | 0.572 |
0.7046 |
| AF-B4ETL9-F1-model_v4 | 7 | 584 | 1 | 553 | 0.5711 |
0.7021 |
| AF-Q4ZSZ0-F1-model_v4 | 11 | 584 | 1 | 550 | 0.5702 |
0.7017 |
| AF-A8GDR9-F1-model_v4 | 11 | 584 | 1 | 555 | 0.5681 |
0.6971 |
| AF-Q02R27-F1-model_v4 | 11 | 585 | 1 | 549 | 0.5673 |
0.6989 |
| AF-Q8ZDX9-F1-model_v4 | 10 | 584 | 1 | 554 | 0.5666 |
0.6961 |