Cluster: HRGMv2_4304_CGC40
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_4304
- CGC Family ID: CGCFAM_09610
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4304_18 | HRGMv2_4304_18_26 | 26877 | 28412 | - | 2.A.66.1.40 |
| STP | HRGMv2_4304_18 | HRGMv2_4304_18_27 | 28409 | 29596 | - | Fer4 |
| pfam | HRGMv2_4304_18 | HRGMv2_4304_18_28 | 29693 | 30880 | - | PS_pyruv_trans |
| CAZyme | HRGMv2_4304_18 | HRGMv2_4304_18_29 | 30891 | 31928 | - | GT113 |
| CAZyme | HRGMv2_4304_18 | HRGMv2_4304_18_30 | 31966 | 32775 | - | GT11 |
| NULL(UNKNOWN) | HRGMv2_4304_18 | HRGMv2_4304_18_31 | 32812 | 34071 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4304_18 | HRGMv2_4304_18_32 | 34083 | 34904 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_4304_18 | HRGMv2_4304_18_33 | 34914 | 35819 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4304_18 | HRGMv2_4304_18_34 | 35841 | 36956 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_4304_18 | HRGMv2_4304_18_35 | 36966 | 37820 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4304_18 | HRGMv2_4304_18_36 | 37833 | 38363 | - | Hexapep | Hexapep_2 | Hexapep_2 |
| CAZyme | HRGMv2_4304_18 | HRGMv2_4304_18_37 | 38442 | 39632 | - | GT4 |
| CAZyme | HRGMv2_4304_18 | HRGMv2_4304_18_38 | 39634 | 40416 | - | GT26 |
Gene ID: HRGMv2_4304_18_26
Type: TC
Location: 26877 - 28412 (-)
Type: TC
Location: 26877 - 28412 (-)
Gene ID: HRGMv2_4304_18_27
Type: STP
Location: 28409 - 29596 (-)
Type: STP
Location: 28409 - 29596 (-)
Gene ID: HRGMv2_4304_18_28
Type: pfam
Location: 29693 - 30880 (-)
Type: pfam
Location: 29693 - 30880 (-)
Gene ID: HRGMv2_4304_18_29
Type: CAZyme
Location: 30891 - 31928 (-)
Type: CAZyme
Location: 30891 - 31928 (-)
Gene ID: HRGMv2_4304_18_30
Type: CAZyme
Location: 31966 - 32775 (-)
Type: CAZyme
Location: 31966 - 32775 (-)
Gene ID: HRGMv2_4304_18_31
Type:
Location: 32812 - 34071 (-)
Type:
Location: 32812 - 34071 (-)
Gene ID: HRGMv2_4304_18_32
Type: CAZyme
Location: 34083 - 34904 (-)
Type: CAZyme
Location: 34083 - 34904 (-)
Gene ID: HRGMv2_4304_18_33
Type:
Location: 34914 - 35819 (-)
Type:
Location: 34914 - 35819 (-)
Gene ID: HRGMv2_4304_18_34
Type: CAZyme
Location: 35841 - 36956 (-)
Type: CAZyme
Location: 35841 - 36956 (-)
Gene ID: HRGMv2_4304_18_35
Type:
Location: 36966 - 37820 (-)
Type:
Location: 36966 - 37820 (-)
Gene ID: HRGMv2_4304_18_36
Type: pfam
Location: 37833 - 38363 (-)
Type: pfam
Location: 37833 - 38363 (-)
Gene ID: HRGMv2_4304_18_37
Type: CAZyme
Location: 38442 - 39632 (-)
Type: CAZyme
Location: 38442 - 39632 (-)
Gene ID: HRGMv2_4304_18_38
Type: CAZyme
Location: 39634 - 40416 (-)
Type: CAZyme
Location: 39634 - 40416 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.