PROTEIN: HRGMv2_4304_18_33
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Protein File & Metadata
Source:
HRGMv2_4304_18_33.pdb
Genome ID:
Protein ID:
HRGMv2_4304_18_33
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Protein Sequence
MDNDNMIKKQ LVKLYRNTRL KLDYAGKGLL TEAQGNECIK RFVNGDTPFL LGRFGAVEMH 60 CVSRWMLGQG CTEEERNQAL YAAGIFPNDQ RSINHFCQEY SESIKCVDIL GVWEVTGEKK 120 AVNRFCPQAK LIPSRSIEPY YFDAPWSAAL DRKKVLIVHP FVESIAGQLQ RREQIWPGKD 180 VLPCFQSVAF VRAVQSNAGA KTSFSDWFEA LESMKCEISQ ADFDIAIIGA GAYGLPLAAY 240 VKSLGKQAIQ MSGATQILFG IKGKRWDEHP VISKFYNDAW VRPLQSETPP ETKKVEGGSY 300 W 301
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UJF32789.1 | GT101 | 19 | 297 | 23 | 254 | 0.585 |
0.7073 |
| AF-A0A5B8IT71-F1-model_v4 | GT101 | 1 | 288 | 60 | 320 | 0.5745 |
0.6971 |
| AF-A0A2S2F9F8-F1-model_v4 | GT101 | 11 | 290 | 136 | 379 | 0.5216 |
0.7191 |
| A0A9Q4GSR7 | GT101 | 15 | 301 | 145 | 381 | 0.5158 |
0.7286 |
| A0A1S8KXI8 | GT2 | 22 | 298 | 1 | 275 | 0.5016 |
0.6952 |
| AF-A0A1S8KXI8-F1-model_v4 | GT2 | 22 | 298 | 1 | 275 | 0.5016 |
0.6952 |
| QXM05394.1 | GT2 | 22 | 295 | 7 | 355 | 0.4783 |
0.6911 |
| BBK37810.1 | GT2 , GT32 | 1 | 275 | 820 | 1210 | 0.4611 |
0.8135 |
| QRQ80003.1 | GT101 | 1 | 301 | 477 | 736 | 0.4461 |
0.7252 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UJF32789.1 | GT101 | 19 | 297 | 23 | 254 | 0.585 |
0.7073 |
| A0A5B8IT71 | GT101 | 1 | 288 | 60 | 320 | 0.5745 |
0.6971 |
| ALF13819.1 | GT101 | 14 | 301 | 32 | 298 | 0.5734 |
0.6816 |
| A0A239YZI0 | GT101 | 19 | 301 | 21 | 294 | 0.5692 |
0.6559 |
| A0A1D7YV49 | GT101 | 11 | 292 | 18 | 298 | 0.5616 |
0.6331 |
| A0A2S2F9F8 | GT101 | 11 | 290 | 136 | 379 | 0.5216 |
0.7191 |
| A0A9Q4GSR7 | GT101 | 15 | 301 | 145 | 381 | 0.5158 |
0.7286 |
| A0A1S8KXI8 | GT2 | 22 | 298 | 1 | 275 | 0.5016 |
0.6952 |
| QXM05394.1 | GT2 | 22 | 295 | 7 | 355 | 0.4783 |
0.6911 |
| BBK37810.1 | GT2 , GT32 | 1 | 275 | 820 | 1210 | 0.4611 |
0.8135 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.