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Cluster: HRGMv2_4245_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4245_5 HRGMv2_4245_5_97 109656 110825 - GH88
TF HRGMv2_4245_5 HRGMv2_4245_5_98 110934 111743 + HTH_AraC
TC HRGMv2_4245_5 HRGMv2_4245_5_99 111805 112917 + 3.A.1.1.38
TC HRGMv2_4245_5 HRGMv2_4245_5_100 112914 113807 + 3.A.1.1.11
TC HRGMv2_4245_5 HRGMv2_4245_5_101 113832 114695 + 3.A.1.1.36
STP HRGMv2_4245_5 HRGMv2_4245_5_102 114692 116293 + SBP_bac_1
NULL(UNKNOWN) HRGMv2_4245_5 HRGMv2_4245_5_103 116354 117184 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4245_5 HRGMv2_4245_5_104 117444 119123 + CBM91 | GH43_11
TC HRGMv2_4245_5 HRGMv2_4245_5_105 119244 120644 + 3.A.1.1.24
TC HRGMv2_4245_5 HRGMv2_4245_5_106 120738 121628 + 3.A.1.1.28
TC HRGMv2_4245_5 HRGMv2_4245_5_107 121628 122464 + 3.A.1.1.45
TC HRGMv2_4245_5 HRGMv2_4245_5_108 122616 124466 + 8.A.59.2.1
TF HRGMv2_4245_5 HRGMv2_4245_5_109 124444 125931 + HTH_AraC | HTH_AraC
NULL(UNKNOWN) HRGMv2_4245_5 HRGMv2_4245_5_110 125946 128045 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4245_5 HRGMv2_4245_5_111 128185 128544 + 9.B.55.2.1
pfam HRGMv2_4245_5 HRGMv2_4245_5_112 128546 129370 + EcsC
TC HRGMv2_4245_5 HRGMv2_4245_5_113 129605 131011 + 2.A.25.1.4
CAZyme HRGMv2_4245_5 HRGMv2_4245_5_114 131124 132224 + GT2
Gene ID: HRGMv2_4245_5_97
Type: CAZyme
Location: 109656 - 110825 (-)
Gene ID: HRGMv2_4245_5_98
Type: TF
Location: 110934 - 111743 (+)
Gene ID: HRGMv2_4245_5_99
Type: TC
Location: 111805 - 112917 (+)
Gene ID: HRGMv2_4245_5_100
Type: TC
Location: 112914 - 113807 (+)
Gene ID: HRGMv2_4245_5_101
Type: TC
Location: 113832 - 114695 (+)
Gene ID: HRGMv2_4245_5_102
Type: STP
Location: 114692 - 116293 (+)
Gene ID: HRGMv2_4245_5_103
Type:
Location: 116354 - 117184 (+)
Gene ID: HRGMv2_4245_5_104
Type: CAZyme
Location: 117444 - 119123 (+)
Gene ID: HRGMv2_4245_5_105
Type: TC
Location: 119244 - 120644 (+)
Gene ID: HRGMv2_4245_5_106
Type: TC
Location: 120738 - 121628 (+)
Gene ID: HRGMv2_4245_5_107
Type: TC
Location: 121628 - 122464 (+)
Gene ID: HRGMv2_4245_5_108
Type: TC
Location: 122616 - 124466 (+)
Gene ID: HRGMv2_4245_5_109
Type: TF
Location: 124444 - 125931 (+)
Gene ID: HRGMv2_4245_5_110
Type:
Location: 125946 - 128045 (+)
Gene ID: HRGMv2_4245_5_111
Type: TC
Location: 128185 - 128544 (+)
Gene ID: HRGMv2_4245_5_112
Type: pfam
Location: 128546 - 129370 (+)
Gene ID: HRGMv2_4245_5_113
Type: TC
Location: 129605 - 131011 (+)
Gene ID: HRGMv2_4245_5_114
Type: CAZyme
Location: 131124 - 132224 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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