PROTEIN: HRGMv2_4245_5_110
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Protein File & Metadata
Source:
HRGMv2_4245_5_110.pdb
Genome ID:
Protein ID:
HRGMv2_4245_5_110
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Protein Sequence
MIIDKKTGKA FTNLWFGNFY RPAYDDEEFV RQAVELIKYL GFNSVLLDSK AWEDFRERFN 60 GGEASQYVKM QEFMQKELIE QGISYDFLSL YLNGDNLYPN IRFSPPIYGE SVVQPDGRDG 120 KWYRYWSPKA RKSMEDHVHG LLKLYGAQQT VILTEDGEKK PMCSMWDPIV APSFDEEGRE 180 RYLTWLKGRY DGRIEQLNQV YGLKADSFET LKPEEYWFTL KFPDRTSFSQ EEAFKGEPAF 240 WILADNRRWQ RDELIDYFKD MKERLHRLDK DLWLCPDLAQ WGYFLNVDGA MLSGVGMADL 300 WDTAVRGIDL YSLSKYVDCA NFLSVPVTPQ GDADIYVACC HHSMMRNMNR GREFVGGIYW 360 GRFLYNHIYD VITPCETVAS IAASGASGYT SYGMCGLDDG GVLHRMEEYF NQSLKRANEW 420 LQEILPRLGK RKSAKTAILF PSAMALCETM RTENNKERRL DLLGYYHACL DVGADADVVD 480 GKILWEEDGQ FSYDAVILPE DDCYPAERDL KLEQWLREFV IQGGWVIHSP GSRLAELAFS 540 LKAQEHRADG VNLGEGCMVP STCYRSYIQG EVLGTYLSDG AAAVVRQRIG EGSVVSLGFD 600 YGYAYTAKIC PHVPREQKNN ELYPLNMIKR NLLKELLEEA LEEKLDFHRN IEKKEFEHGI 660 LVINHTSYPY EVKEKGKRYD QYVQGENMLL PHSAVFIER 699
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GP41-F1-model_v4 | 1 | 699 | 5 | 684 | 0.7656 |
0.7928 |
| AF-Q55EN4-F1-model_v4 | 1 | 699 | 134 | 955 | 0.5478 |
0.6396 |
| AF-Q9SYS1-F1-model_v4 | 3 | 693 | 3 | 488 | 0.5449 |
0.6516 |
| AF-P55005-F1-model_v4 | 3 | 693 | 3 | 488 | 0.5443 |
0.6516 |
| AF-P10538-F1-model_v4 | 9 | 694 | 12 | 496 | 0.5428 |
0.6562 |
| AF-B4FW64-F1-model_v4 | 3 | 684 | 75 | 520 | 0.5069 |
0.6902 |
| AF-K7WC35-F1-model_v4 | 4 | 686 | 79 | 521 | 0.5035 |
0.6955 |
| AF-A0A1D6K8T3-F1-model_v4 | 2 | 685 | 78 | 518 | 0.503 |
0.696 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6F8Y4E0-F1-model_v4 | GH42 | 3 | 699 | 1 | 677 | 0.7743 |
0.8 |
| AF-A0A7D7BV88-F1-model_v4 | GH42 | 3 | 699 | 21 | 685 | 0.7501 |
0.7935 |
| AF-A0A2R4MBS1-F1-model_v4 | GH42 | 1 | 699 | 1 | 652 | 0.7478 |
0.7877 |
| AF-A0A402CV22-F1-model_v4 | GH42 | 1 | 698 | 4 | 686 | 0.7406 |
0.7667 |
| A0A8G1WYJ7 | GH42 | 1 | 699 | 5 | 684 | 0.7318 |
0.761 |
| C6LHY7 | GH42 | 1 | 699 | 5 | 685 | 0.7262 |
0.7547 |
| AF-A0A3S9UUH4-F1-model_v4 | GH35 | 1 | 699 | 10 | 713 | 0.7224 |
0.7488 |
| AF-A0A7R7XEM4-F1-model_v4 | GH42 | 27 | 699 | 1 | 681 | 0.7222 |
0.7554 |
| AF-B6H608-F1-model_v4 | GH42 | 1 | 699 | 117 | 820 | 0.6863 |
0.7524 |
| AF-A0A7S9Z1N9-F1-model_v4 | GH0 | 1 | 699 | 34 | 716 | 0.6858 |
0.7246 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7R7EKX0 | GH42 | 2 | 699 | 1 | 671 | 0.7847 |
0.8147 |
| A0A7T3RF75 | GH42 | 1 | 699 | 1 | 677 | 0.7766 |
0.8036 |
| A0A6F8Y4E0 | GH42 | 3 | 699 | 1 | 677 | 0.7743 |
0.8 |
| A8SWS9 | GH42 | 1 | 699 | 4 | 677 | 0.7714 |
0.802 |
| UKS28014.1 | GH42 | 2 | 699 | 1 | 701 | 0.7701 |
0.7867 |
| B5YCK5 | GH42 | 1 | 699 | 1 | 683 | 0.7698 |
0.793 |
| A0A4P6EP31 | GH42 | 1 | 699 | 1 | 682 | 0.7694 |
0.7936 |
| A0A0R1QBN7 | GH42 | 1 | 699 | 2 | 676 | 0.7668 |
0.7957 |
| A0A0X1KS93 | GH42 | 1 | 699 | 1 | 674 | 0.7667 |
0.7964 |
| A0A8J8MK48 | GH42 | 1 | 699 | 3 | 675 | 0.7665 |
0.7962 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4uzs-assembly1.cif.gz_C | 1 | 699 | 7 | 683 | 0.7771 |
0.8059 |
| 4uzs-assembly1.cif.gz_B | 1 | 699 | 6 | 679 | 0.7757 |
0.8057 |
| 4ucf-assembly1.cif.gz_B | 1 | 699 | 6 | 686 | 0.7739 |
0.8 |
| 4ucf-assembly1.cif.gz_C | 1 | 699 | 7 | 684 | 0.7738 |
0.8022 |
| 4ucf-assembly1.cif.gz_A | 1 | 699 | 6 | 682 | 0.7715 |
0.7998 |
| 8ibr-assembly1.cif.gz_A | 1 | 699 | 8 | 691 | 0.7693 |
0.7947 |
| 4uoz-assembly1.cif.gz_C | 1 | 699 | 5 | 688 | 0.7689 |
0.7932 |
| 5e9a-assembly1.cif.gz_A | 1 | 699 | 4 | 678 | 0.7685 |
0.7976 |
| 8ibs-assembly2.cif.gz_F | 1 | 699 | 8 | 691 | 0.7681 |
0.7936 |
| 8ibt-assembly1.cif.gz_A | 1 | 699 | 8 | 690 | 0.7677 |
0.7958 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-C6H178-F1-model_v4 | 1 | 699 | 1 | 667 | 0.7743 |
0.8064 |
| AF-Q5FJ41-F1-model_v4 | 1 | 699 | 1 | 667 | 0.7738 |
0.806 |
| AF-Q09HN2-F1-model_v4 | 1 | 699 | 1 | 675 | 0.773 |
0.8007 |
| AF-D4QFE7-F1-model_v4 | 1 | 699 | 9 | 689 | 0.7728 |
0.8004 |
| AF-Q9KI47-F1-model_v4 | 1 | 699 | 1 | 676 | 0.7727 |
0.7998 |
| AF-Q93GI5-F1-model_v4 | 1 | 699 | 8 | 691 | 0.7705 |
0.7958 |
| AF-D9SM34-F1-model_v4 | 10 | 699 | 1 | 658 | 0.7681 |
0.8049 |
| AF-C8WV58-F1-model_v4 | 1 | 699 | 5 | 683 | 0.7676 |
0.7968 |
| AF-Q0TUR6-F1-model_v4 | 1 | 699 | 5 | 689 | 0.7674 |
0.7913 |
| AF-D5JGG0-F1-model_v4 | 1 | 699 | 1 | 662 | 0.7667 |
0.8026 |