Cluster: HRGMv2_4240_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4240
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4240_19 | HRGMv2_4240_19_4 | 2797 | 3681 | + | 3.A.1.1.20 |
| TC | HRGMv2_4240_19 | HRGMv2_4240_19_5 | 3694 | 4584 | + | 3.A.1.1.25 |
| pfam | HRGMv2_4240_19 | HRGMv2_4240_19_6 | 4594 | 4803 | + | DUF6903 |
| CAZyme | HRGMv2_4240_19 | HRGMv2_4240_19_7 | 4834 | 6993 | + | GH112 |
Gene ID: HRGMv2_4240_19_4
Type: TC
Location: 2797 - 3681 (+)
Type: TC
Location: 2797 - 3681 (+)
Gene ID: HRGMv2_4240_19_5
Type: TC
Location: 3694 - 4584 (+)
Type: TC
Location: 3694 - 4584 (+)
Gene ID: HRGMv2_4240_19_6
Type: pfam
Location: 4594 - 4803 (+)
Type: pfam
Location: 4594 - 4803 (+)
Gene ID: HRGMv2_4240_19_7
Type: CAZyme
Location: 4834 - 6993 (+)
Type: CAZyme
Location: 4834 - 6993 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Merdiplasma
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.