Cluster: HRGMv2_4240_CGC23
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4240
- CGC Family ID: CGCFAM_03805
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4240_227 | HRGMv2_4240_227_2 | 1105 | 2424 | - | GH43_4 |
| TC | HRGMv2_4240_227 | HRGMv2_4240_227_3 | 2504 | 3373 | - | 3.A.1.1.11 |
| TC | HRGMv2_4240_227 | HRGMv2_4240_227_4 | 3388 | 4056 | - | 3.A.1.1.37 |
Gene ID: HRGMv2_4240_227_2
Type: CAZyme
Location: 1105 - 2424 (-)
Type: CAZyme
Location: 1105 - 2424 (-)
Gene ID: HRGMv2_4240_227_3
Type: TC
Location: 2504 - 3373 (-)
Type: TC
Location: 2504 - 3373 (-)
Gene ID: HRGMv2_4240_227_4
Type: TC
Location: 3388 - 4056 (-)
Type: TC
Location: 3388 - 4056 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Merdiplasma
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.