Cluster: HRGMv2_4240_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4240
- CGC Family ID: CGCFAM_00032
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4240_52 | HRGMv2_4240_52_11 | 10356 | 11759 | + | 9.B.18.1.3 |
| CAZyme | HRGMv2_4240_52 | HRGMv2_4240_52_12 | 11699 | 12541 | + | GT2 |
| TC | HRGMv2_4240_52 | HRGMv2_4240_52_13 | 12608 | 12928 | + | 3.A.1.104.1 |
Gene ID: HRGMv2_4240_52_11
Type: TC
Location: 10356 - 11759 (+)
Type: TC
Location: 10356 - 11759 (+)
Gene ID: HRGMv2_4240_52_12
Type: CAZyme
Location: 11699 - 12541 (+)
Type: CAZyme
Location: 11699 - 12541 (+)
Gene ID: HRGMv2_4240_52_13
Type: TC
Location: 12608 - 12928 (+)
Type: TC
Location: 12608 - 12928 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Merdiplasma
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.