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Cluster: HRGMv2_4238_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4238_8 HRGMv2_4238_8_97 108146 110572 - GH39
STP HRGMv2_4238_8 HRGMv2_4238_8_98 110862 112448 + SBP_bac_1
TC HRGMv2_4238_8 HRGMv2_4238_8_99 112511 113875 + 3.A.1.1.25
TC HRGMv2_4238_8 HRGMv2_4238_8_100 113889 114788 + 3.A.1.1.29
pfam HRGMv2_4238_8 HRGMv2_4238_8_101 114815 115741 + FMN_red
pfam HRGMv2_4238_8 HRGMv2_4238_8_102 115781 116119 + SnoaL | SnoaL_2
CAZyme HRGMv2_4238_8 HRGMv2_4238_8_103 116298 117935 + CBM91 | GH43_12
CAZyme HRGMv2_4238_8 HRGMv2_4238_8_104 118117 119616 + GH140
Gene ID: HRGMv2_4238_8_97
Type: CAZyme
Location: 108146 - 110572 (-)
Gene ID: HRGMv2_4238_8_98
Type: STP
Location: 110862 - 112448 (+)
Gene ID: HRGMv2_4238_8_99
Type: TC
Location: 112511 - 113875 (+)
Gene ID: HRGMv2_4238_8_100
Type: TC
Location: 113889 - 114788 (+)
Gene ID: HRGMv2_4238_8_101
Type: pfam
Location: 114815 - 115741 (+)
Gene ID: HRGMv2_4238_8_102
Type: pfam
Location: 115781 - 116119 (+)
Gene ID: HRGMv2_4238_8_103
Type: CAZyme
Location: 116298 - 117935 (+)
Gene ID: HRGMv2_4238_8_104
Type: CAZyme
Location: 118117 - 119616 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
14-2
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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