Cluster: HRGMv2_4238_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4238
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4238_8 | HRGMv2_4238_8_82 | 90343 | 91887 | + | 1.C.105.2.8 |
| CAZyme | HRGMv2_4238_8 | HRGMv2_4238_8_83 | 91949 | 93973 | + | GT51 |
| pfam | HRGMv2_4238_8 | HRGMv2_4238_8_84 | 94013 | 95566 | - | HTH_30 | GGDEF_2 |
| CAZyme | HRGMv2_4238_8 | HRGMv2_4238_8_85 | 96003 | 97712 | + | GH13_20 |
Gene ID: HRGMv2_4238_8_82
Type: TC
Location: 90343 - 91887 (+)
Type: TC
Location: 90343 - 91887 (+)
Gene ID: HRGMv2_4238_8_83
Type: CAZyme
Location: 91949 - 93973 (+)
Type: CAZyme
Location: 91949 - 93973 (+)
Gene ID: HRGMv2_4238_8_84
Type: pfam
Location: 94013 - 95566 (-)
Type: pfam
Location: 94013 - 95566 (-)
Gene ID: HRGMv2_4238_8_85
Type: CAZyme
Location: 96003 - 97712 (+)
Type: CAZyme
Location: 96003 - 97712 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
14-2
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.