Cluster: HRGMv2_4238_CGC4
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4238
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4238_4 | HRGMv2_4238_4_94 | 102367 | 103548 | + | 2.A.86.1.8 |
| peptidase | HRGMv2_4238_4 | HRGMv2_4238_4_95 | 103703 | 104995 | + | C26.UNW |
| TF | HRGMv2_4238_4 | HRGMv2_4238_4_96 | 105093 | 106184 | - | LacI |
| TC | HRGMv2_4238_4 | HRGMv2_4238_4_97 | 106552 | 108717 | + | 4.A.1.1.17 |
| pfam | HRGMv2_4238_4 | HRGMv2_4238_4_98 | 108732 | 109580 | + | Exo_endo_phos |
| CAZyme | HRGMv2_4238_4 | HRGMv2_4238_4_99 | 109656 | 111164 | + | GH77 |
| TC | HRGMv2_4238_4 | HRGMv2_4238_4_100 | 111213 | 111470 | + | 8.A.8.1.1 |
| TC | HRGMv2_4238_4 | HRGMv2_4238_4_101 | 111558 | 113180 | + | 8.A.7.1.1 |
| TF | HRGMv2_4238_4 | HRGMv2_4238_4_102 | 113331 | 114212 | - | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | HRGMv2_4238_4 | HRGMv2_4238_4_103 | 114431 | 114835 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4238_4 | HRGMv2_4238_4_104 | 114778 | 116583 | + | 3.A.1.106.2 |
Gene ID: HRGMv2_4238_4_94
Type: TC
Location: 102367 - 103548 (+)
Type: TC
Location: 102367 - 103548 (+)
Gene ID: HRGMv2_4238_4_95
Type: peptidase
Location: 103703 - 104995 (+)
Type: peptidase
Location: 103703 - 104995 (+)
Gene ID: HRGMv2_4238_4_96
Type: TF
Location: 105093 - 106184 (-)
Type: TF
Location: 105093 - 106184 (-)
Gene ID: HRGMv2_4238_4_97
Type: TC
Location: 106552 - 108717 (+)
Type: TC
Location: 106552 - 108717 (+)
Gene ID: HRGMv2_4238_4_98
Type: pfam
Location: 108732 - 109580 (+)
Type: pfam
Location: 108732 - 109580 (+)
Gene ID: HRGMv2_4238_4_99
Type: CAZyme
Location: 109656 - 111164 (+)
Type: CAZyme
Location: 109656 - 111164 (+)
Gene ID: HRGMv2_4238_4_100
Type: TC
Location: 111213 - 111470 (+)
Type: TC
Location: 111213 - 111470 (+)
Gene ID: HRGMv2_4238_4_101
Type: TC
Location: 111558 - 113180 (+)
Type: TC
Location: 111558 - 113180 (+)
Gene ID: HRGMv2_4238_4_102
Type: TF
Location: 113331 - 114212 (-)
Type: TF
Location: 113331 - 114212 (-)
Gene ID: HRGMv2_4238_4_103
Type:
Location: 114431 - 114835 (+)
Type:
Location: 114431 - 114835 (+)
Gene ID: HRGMv2_4238_4_104
Type: TC
Location: 114778 - 116583 (+)
Type: TC
Location: 114778 - 116583 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
14-2
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.