Cluster: HRGMv2_4238_CGC33
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4238
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4238_47 | HRGMv2_4238_47_1 | 670 | 2781 | + | CBM34 | GH13_39 |
| pfam | HRGMv2_4238_47 | HRGMv2_4238_47_2 | 3349 | 4197 | + | AP_endonuc_2 |
| pfam | HRGMv2_4238_47 | HRGMv2_4238_47_3 | 4267 | 4737 | + | LOR |
| TC | HRGMv2_4238_47 | HRGMv2_4238_47_4 | 4783 | 5709 | + | 2.A.7.3.52 |
Gene ID: HRGMv2_4238_47_1
Type: CAZyme
Location: 670 - 2781 (+)
Type: CAZyme
Location: 670 - 2781 (+)
Gene ID: HRGMv2_4238_47_2
Type: pfam
Location: 3349 - 4197 (+)
Type: pfam
Location: 3349 - 4197 (+)
Gene ID: HRGMv2_4238_47_3
Type: pfam
Location: 4267 - 4737 (+)
Type: pfam
Location: 4267 - 4737 (+)
Gene ID: HRGMv2_4238_47_4
Type: TC
Location: 4783 - 5709 (+)
Type: TC
Location: 4783 - 5709 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
14-2
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.