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Cluster: HRGMv2_4238_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4238_41 HRGMv2_4238_41_2 1531 2172 + 2.A.2.1.1
TC HRGMv2_4238_41 HRGMv2_4238_41_3 2191 2889 + 2.A.2.2.1
CAZyme HRGMv2_4238_41 HRGMv2_4238_41_4 2876 4717 + GH13_31
pfam HRGMv2_4238_41 HRGMv2_4238_41_5 4793 5038 + TM1266-like
pfam HRGMv2_4238_41 HRGMv2_4238_41_6 5053 6258 + GTP_EFTU | MMR_HSR1 | FeoB_N | HydF_dimer | HydF_tetramer
TC HRGMv2_4238_41 HRGMv2_4238_41_7 6404 8071 + 2.A.53.3.11
CAZyme HRGMv2_4238_41 HRGMv2_4238_41_8 8118 9932 + GT5
peptidase HRGMv2_4238_41 HRGMv2_4238_41_9 9963 11411 + M20.UPW
TF HRGMv2_4238_41 HRGMv2_4238_41_10 11458 12180 - HTH_AraC | HTH_AraC
TC HRGMv2_4238_41 HRGMv2_4238_41_11 12344 13732 + 2.A.2.3.1
Gene ID: HRGMv2_4238_41_2
Type: TC
Location: 1531 - 2172 (+)
Gene ID: HRGMv2_4238_41_3
Type: TC
Location: 2191 - 2889 (+)
Gene ID: HRGMv2_4238_41_4
Type: CAZyme
Location: 2876 - 4717 (+)
Gene ID: HRGMv2_4238_41_5
Type: pfam
Location: 4793 - 5038 (+)
Gene ID: HRGMv2_4238_41_6
Type: pfam
Location: 5053 - 6258 (+)
Gene ID: HRGMv2_4238_41_7
Type: TC
Location: 6404 - 8071 (+)
Gene ID: HRGMv2_4238_41_8
Type: CAZyme
Location: 8118 - 9932 (+)
Gene ID: HRGMv2_4238_41_9
Type: peptidase
Location: 9963 - 11411 (+)
Gene ID: HRGMv2_4238_41_10
Type: TF
Location: 11458 - 12180 (-)
Gene ID: HRGMv2_4238_41_11
Type: TC
Location: 12344 - 13732 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
14-2
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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