Cluster: HRGMv2_4238_CGC29
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4238
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4238_32 | HRGMv2_4238_32_1 | 62 | 2542 | - | GH39 |
| TC | HRGMv2_4238_32 | HRGMv2_4238_32_2 | 2788 | 4299 | + | 3.A.1.2.20 |
| TC | HRGMv2_4238_32 | HRGMv2_4238_32_3 | 4315 | 5298 | + | 3.A.1.2.16 |
| NULL(UNKNOWN) | HRGMv2_4238_32 | HRGMv2_4238_32_4 | 5398 | 6636 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4238_32 | HRGMv2_4238_32_5 | 6719 | 7708 | + | BPD_transp_2 |
| CAZyme | HRGMv2_4238_32 | HRGMv2_4238_32_6 | 7973 | 10306 | + | CBM67 | GH78 |
| TF | HRGMv2_4238_32 | HRGMv2_4238_32_7 | 10344 | 11447 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4238_32 | HRGMv2_4238_32_8 | 11707 | 12882 | + | GT1 |
Gene ID: HRGMv2_4238_32_1
Type: CAZyme
Location: 62 - 2542 (-)
Type: CAZyme
Location: 62 - 2542 (-)
Gene ID: HRGMv2_4238_32_2
Type: TC
Location: 2788 - 4299 (+)
Type: TC
Location: 2788 - 4299 (+)
Gene ID: HRGMv2_4238_32_3
Type: TC
Location: 4315 - 5298 (+)
Type: TC
Location: 4315 - 5298 (+)
Gene ID: HRGMv2_4238_32_4
Type:
Location: 5398 - 6636 (+)
Type:
Location: 5398 - 6636 (+)
Gene ID: HRGMv2_4238_32_5
Type: pfam
Location: 6719 - 7708 (+)
Type: pfam
Location: 6719 - 7708 (+)
Gene ID: HRGMv2_4238_32_6
Type: CAZyme
Location: 7973 - 10306 (+)
Type: CAZyme
Location: 7973 - 10306 (+)
Gene ID: HRGMv2_4238_32_7
Type: TF
Location: 10344 - 11447 (-)
Type: TF
Location: 10344 - 11447 (-)
Gene ID: HRGMv2_4238_32_8
Type: CAZyme
Location: 11707 - 12882 (+)
Type: CAZyme
Location: 11707 - 12882 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
14-2
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.