Cluster: HRGMv2_4238_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4238
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4238_24 | HRGMv2_4238_24_49 | 44714 | 46474 | - | GT4 |
| TC | HRGMv2_4238_24 | HRGMv2_4238_24_50 | 46483 | 48819 | - | 3.A.5.10.1 |
| pfam | HRGMv2_4238_24 | HRGMv2_4238_24_51 | 48821 | 49270 | - | Sec-ASP3 |
| TC | HRGMv2_4238_24 | HRGMv2_4238_24_52 | 49271 | 50779 | - | 3.A.5.10.1 |
| TC | HRGMv2_4238_24 | HRGMv2_4238_24_53 | 50742 | 52361 | - | 3.A.5.10.1 |
| TC | HRGMv2_4238_24 | HRGMv2_4238_24_54 | 52370 | 53575 | - | 3.A.5.3.1 |
Gene ID: HRGMv2_4238_24_49
Type: CAZyme
Location: 44714 - 46474 (-)
Type: CAZyme
Location: 44714 - 46474 (-)
Gene ID: HRGMv2_4238_24_50
Type: TC
Location: 46483 - 48819 (-)
Type: TC
Location: 46483 - 48819 (-)
Gene ID: HRGMv2_4238_24_51
Type: pfam
Location: 48821 - 49270 (-)
Type: pfam
Location: 48821 - 49270 (-)
Gene ID: HRGMv2_4238_24_52
Type: TC
Location: 49271 - 50779 (-)
Type: TC
Location: 49271 - 50779 (-)
Gene ID: HRGMv2_4238_24_53
Type: TC
Location: 50742 - 52361 (-)
Type: TC
Location: 50742 - 52361 (-)
Gene ID: HRGMv2_4238_24_54
Type: TC
Location: 52370 - 53575 (-)
Type: TC
Location: 52370 - 53575 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
14-2
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.