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Cluster: HRGMv2_4238_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4238_19 HRGMv2_4238_19_36 45703 46881 - 2.A.1.68.1
STP HRGMv2_4238_19 HRGMv2_4238_19_37 47045 47728 + cNMP_binding
TC HRGMv2_4238_19 HRGMv2_4238_19_38 48300 49640 - 2.A.66.1.33
CAZyme HRGMv2_4238_19 HRGMv2_4238_19_39 49718 52462 - GH106
CAZyme HRGMv2_4238_19 HRGMv2_4238_19_40 52541 54745 - GH3
CAZyme HRGMv2_4238_19 HRGMv2_4238_19_41 54763 56313 - GH35
TF HRGMv2_4238_19 HRGMv2_4238_19_42 56520 57374 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_4238_19 HRGMv2_4238_19_43 57429 58220 - CE1
TC HRGMv2_4238_19 HRGMv2_4238_19_44 58254 59120 - 3.A.1.1.29
TC HRGMv2_4238_19 HRGMv2_4238_19_45 59133 60077 - 3.A.1.1.9
Gene ID: HRGMv2_4238_19_36
Type: TC
Location: 45703 - 46881 (-)
Gene ID: HRGMv2_4238_19_37
Type: STP
Location: 47045 - 47728 (+)
Gene ID: HRGMv2_4238_19_38
Type: TC
Location: 48300 - 49640 (-)
Gene ID: HRGMv2_4238_19_39
Type: CAZyme
Location: 49718 - 52462 (-)
Gene ID: HRGMv2_4238_19_40
Type: CAZyme
Location: 52541 - 54745 (-)
Gene ID: HRGMv2_4238_19_41
Type: CAZyme
Location: 54763 - 56313 (-)
Gene ID: HRGMv2_4238_19_42
Type: TF
Location: 56520 - 57374 (+)
Gene ID: HRGMv2_4238_19_43
Type: CAZyme
Location: 57429 - 58220 (-)
Gene ID: HRGMv2_4238_19_44
Type: TC
Location: 58254 - 59120 (-)
Gene ID: HRGMv2_4238_19_45
Type: TC
Location: 59133 - 60077 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
14-2
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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