Cluster: HRGMv2_4238_CGC20
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4238
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4238_19 | HRGMv2_4238_19_1 | 201 | 3623 | - | GH3 |
| TC | HRGMv2_4238_19 | HRGMv2_4238_19_2 | 4082 | 5569 | - | 1.B.52.2.2 |
| pfam | HRGMv2_4238_19 | HRGMv2_4238_19_3 | 5887 | 7341 | - | FAD_binding_2 | DAO | Thi4 | FAD_oxidored |
| STP | HRGMv2_4238_19 | HRGMv2_4238_19_4 | 7446 | 8666 | - | Fer4 | Fer4 |
| TC | HRGMv2_4238_19 | HRGMv2_4238_19_5 | 8666 | 10798 | - | 3.D.1.7.1 |
| pfam | HRGMv2_4238_19 | HRGMv2_4238_19_6 | 11032 | 12561 | + | HTH_30 | GGDEF_2 |
| CAZyme | HRGMv2_4238_19 | HRGMv2_4238_19_7 | 12569 | 13549 | - | GH109 |
| TC | HRGMv2_4238_19 | HRGMv2_4238_19_8 | 13657 | 14577 | - | 8.A.5.1.7 |
Gene ID: HRGMv2_4238_19_1
Type: CAZyme
Location: 201 - 3623 (-)
Type: CAZyme
Location: 201 - 3623 (-)
Gene ID: HRGMv2_4238_19_2
Type: TC
Location: 4082 - 5569 (-)
Type: TC
Location: 4082 - 5569 (-)
Gene ID: HRGMv2_4238_19_3
Type: pfam
Location: 5887 - 7341 (-)
Type: pfam
Location: 5887 - 7341 (-)
Gene ID: HRGMv2_4238_19_4
Type: STP
Location: 7446 - 8666 (-)
Type: STP
Location: 7446 - 8666 (-)
Gene ID: HRGMv2_4238_19_5
Type: TC
Location: 8666 - 10798 (-)
Type: TC
Location: 8666 - 10798 (-)
Gene ID: HRGMv2_4238_19_6
Type: pfam
Location: 11032 - 12561 (+)
Type: pfam
Location: 11032 - 12561 (+)
Gene ID: HRGMv2_4238_19_7
Type: CAZyme
Location: 12569 - 13549 (-)
Type: CAZyme
Location: 12569 - 13549 (-)
Gene ID: HRGMv2_4238_19_8
Type: TC
Location: 13657 - 14577 (-)
Type: TC
Location: 13657 - 14577 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
14-2
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.