Cluster: HRGMv2_4238_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4238
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4238_17 | HRGMv2_4238_17_7 | 5472 | 6254 | - | 1.A.30.1.6 |
| pfam | HRGMv2_4238_17 | HRGMv2_4238_17_8 | 6409 | 7101 | - | DNA_alkylation |
| TC | HRGMv2_4238_17 | HRGMv2_4238_17_9 | 7250 | 8773 | - | 1.B.52.2.2 |
| pfam | HRGMv2_4238_17 | HRGMv2_4238_17_10 | 8866 | 8988 | - | Cys_rich_KTR |
| STP | HRGMv2_4238_17 | HRGMv2_4238_17_11 | 8991 | 9605 | - | TetR_N |
| CAZyme | HRGMv2_4238_17 | HRGMv2_4238_17_12 | 9755 | 10561 | - | CE4 |
Gene ID: HRGMv2_4238_17_7
Type: TC
Location: 5472 - 6254 (-)
Type: TC
Location: 5472 - 6254 (-)
Gene ID: HRGMv2_4238_17_8
Type: pfam
Location: 6409 - 7101 (-)
Type: pfam
Location: 6409 - 7101 (-)
Gene ID: HRGMv2_4238_17_9
Type: TC
Location: 7250 - 8773 (-)
Type: TC
Location: 7250 - 8773 (-)
Gene ID: HRGMv2_4238_17_10
Type: pfam
Location: 8866 - 8988 (-)
Type: pfam
Location: 8866 - 8988 (-)
Gene ID: HRGMv2_4238_17_11
Type: STP
Location: 8991 - 9605 (-)
Type: STP
Location: 8991 - 9605 (-)
Gene ID: HRGMv2_4238_17_12
Type: CAZyme
Location: 9755 - 10561 (-)
Type: CAZyme
Location: 9755 - 10561 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
14-2
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.