Cluster: HRGMv2_4238_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4238
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4238_1 | HRGMv2_4238_1_72 | 60037 | 62727 | - | 3.A.12.1.1 |
| pfam | HRGMv2_4238_1 | HRGMv2_4238_1_73 | 62740 | 63618 | - | BacA |
| peptidase | HRGMv2_4238_1 | HRGMv2_4238_1_74 | 63744 | 64448 | - | S14.UPW |
| CAZyme | HRGMv2_4238_1 | HRGMv2_4238_1_75 | 64586 | 66037 | - | GT5 |
Gene ID: HRGMv2_4238_1_72
Type: TC
Location: 60037 - 62727 (-)
Type: TC
Location: 60037 - 62727 (-)
Gene ID: HRGMv2_4238_1_73
Type: pfam
Location: 62740 - 63618 (-)
Type: pfam
Location: 62740 - 63618 (-)
Gene ID: HRGMv2_4238_1_74
Type: peptidase
Location: 63744 - 64448 (-)
Type: peptidase
Location: 63744 - 64448 (-)
Gene ID: HRGMv2_4238_1_75
Type: CAZyme
Location: 64586 - 66037 (-)
Type: CAZyme
Location: 64586 - 66037 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
14-2
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.