Cluster: HRGMv2_4234_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4234
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4234_12 | HRGMv2_4234_12_15 | 19581 | 20453 | - | 3.A.1.132.6 |
| TF | HRGMv2_4234_12 | HRGMv2_4234_12_16 | 20455 | 20829 | - | GntR |
| pfam | HRGMv2_4234_12 | HRGMv2_4234_12_17 | 21065 | 21919 | + | S-methyl_trans |
| CAZyme | HRGMv2_4234_12 | HRGMv2_4234_12_18 | 21971 | 24250 | - | GH20 |
| TC | HRGMv2_4234_12 | HRGMv2_4234_12_19 | 24944 | 26278 | + | 2.A.66.1.13 |
Gene ID: HRGMv2_4234_12_15
Type: TC
Location: 19581 - 20453 (-)
Type: TC
Location: 19581 - 20453 (-)
Gene ID: HRGMv2_4234_12_16
Type: TF
Location: 20455 - 20829 (-)
Type: TF
Location: 20455 - 20829 (-)
Gene ID: HRGMv2_4234_12_17
Type: pfam
Location: 21065 - 21919 (+)
Type: pfam
Location: 21065 - 21919 (+)
Gene ID: HRGMv2_4234_12_18
Type: CAZyme
Location: 21971 - 24250 (-)
Type: CAZyme
Location: 21971 - 24250 (-)
Gene ID: HRGMv2_4234_12_19
Type: TC
Location: 24944 - 26278 (+)
Type: TC
Location: 24944 - 26278 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.