Cluster: HRGMv2_4234_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4234
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4234_5 | HRGMv2_4234_5_33 | 38461 | 39177 | + | 3.A.1.122.6 |
| pfam | HRGMv2_4234_5 | HRGMv2_4234_5_34 | 39218 | 42643 | + | FtsX | FtsX |
| pfam | HRGMv2_4234_5 | HRGMv2_4234_5_35 | 42664 | 44043 | + | Methyltr_RsmB-F | Methyltranf_PUA | Methyltr_RsmF_N | RsmF_methylt_CI |
| TC | HRGMv2_4234_5 | HRGMv2_4234_5_36 | 44064 | 44810 | + | 9.B.158.1.1 |
| CAZyme | HRGMv2_4234_5 | HRGMv2_4234_5_37 | 45038 | 49051 | + | CBM51 | GH110 |
Gene ID: HRGMv2_4234_5_33
Type: TC
Location: 38461 - 39177 (+)
Type: TC
Location: 38461 - 39177 (+)
Gene ID: HRGMv2_4234_5_34
Type: pfam
Location: 39218 - 42643 (+)
Type: pfam
Location: 39218 - 42643 (+)
Gene ID: HRGMv2_4234_5_35
Type: pfam
Location: 42664 - 44043 (+)
Type: pfam
Location: 42664 - 44043 (+)
Gene ID: HRGMv2_4234_5_36
Type: TC
Location: 44064 - 44810 (+)
Type: TC
Location: 44064 - 44810 (+)
Gene ID: HRGMv2_4234_5_37
Type: CAZyme
Location: 45038 - 49051 (+)
Type: CAZyme
Location: 45038 - 49051 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.