Cluster: HRGMv2_4234_CGC29
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4234
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4234_103 | HRGMv2_4234_103_2 | 738 | 2639 | + | 4.A.1.2.11 |
| CAZyme | HRGMv2_4234_103 | HRGMv2_4234_103_3 | 2644 | 4077 | + | GH1 |
| NULL(UNKNOWN) | HRGMv2_4234_103 | HRGMv2_4234_103_4 | 4145 | 4681 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4234_103 | HRGMv2_4234_103_5 | 4710 | 5639 | - | AA_kinase |
| TC | HRGMv2_4234_103 | HRGMv2_4234_103_6 | 6337 | 7380 | + | 9.B.70.1.1 |
| pfam | HRGMv2_4234_103 | HRGMv2_4234_103_7 | 7373 | 7891 | + | Spore_III_AB |
| pfam | HRGMv2_4234_103 | HRGMv2_4234_103_8 | 7915 | 8109 | + | SpoIIIAC |
| TC | HRGMv2_4234_103 | HRGMv2_4234_103_9 | 8120 | 8500 | + | 9.B.70.1.1 |
Gene ID: HRGMv2_4234_103_2
Type: TC
Location: 738 - 2639 (+)
Type: TC
Location: 738 - 2639 (+)
Gene ID: HRGMv2_4234_103_3
Type: CAZyme
Location: 2644 - 4077 (+)
Type: CAZyme
Location: 2644 - 4077 (+)
Gene ID: HRGMv2_4234_103_4
Type:
Location: 4145 - 4681 (+)
Type:
Location: 4145 - 4681 (+)
Gene ID: HRGMv2_4234_103_5
Type: pfam
Location: 4710 - 5639 (-)
Type: pfam
Location: 4710 - 5639 (-)
Gene ID: HRGMv2_4234_103_6
Type: TC
Location: 6337 - 7380 (+)
Type: TC
Location: 6337 - 7380 (+)
Gene ID: HRGMv2_4234_103_7
Type: pfam
Location: 7373 - 7891 (+)
Type: pfam
Location: 7373 - 7891 (+)
Gene ID: HRGMv2_4234_103_8
Type: pfam
Location: 7915 - 8109 (+)
Type: pfam
Location: 7915 - 8109 (+)
Gene ID: HRGMv2_4234_103_9
Type: TC
Location: 8120 - 8500 (+)
Type: TC
Location: 8120 - 8500 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.