Cluster: HRGMv2_4234_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4234
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4234_76 | HRGMv2_4234_76_6 | 4145 | 4951 | - | 3.A.1.25.4 |
| TC | HRGMv2_4234_76 | HRGMv2_4234_76_7 | 4959 | 5807 | - | 3.A.1.26.7 |
| TC | HRGMv2_4234_76 | HRGMv2_4234_76_8 | 5783 | 6643 | - | 3.A.1.26.7 |
| pfam | HRGMv2_4234_76 | HRGMv2_4234_76_9 | 6716 | 7573 | - | Acetyltransf_1 | Acetyltransf_3 |
| pfam | HRGMv2_4234_76 | HRGMv2_4234_76_10 | 7762 | 8283 | + | Pro_isomerase |
| CAZyme | HRGMv2_4234_76 | HRGMv2_4234_76_11 | 8346 | 12992 | - | GH2 |
Gene ID: HRGMv2_4234_76_6
Type: TC
Location: 4145 - 4951 (-)
Type: TC
Location: 4145 - 4951 (-)
Gene ID: HRGMv2_4234_76_7
Type: TC
Location: 4959 - 5807 (-)
Type: TC
Location: 4959 - 5807 (-)
Gene ID: HRGMv2_4234_76_8
Type: TC
Location: 5783 - 6643 (-)
Type: TC
Location: 5783 - 6643 (-)
Gene ID: HRGMv2_4234_76_9
Type: pfam
Location: 6716 - 7573 (-)
Type: pfam
Location: 6716 - 7573 (-)
Gene ID: HRGMv2_4234_76_10
Type: pfam
Location: 7762 - 8283 (+)
Type: pfam
Location: 7762 - 8283 (+)
Gene ID: HRGMv2_4234_76_11
Type: CAZyme
Location: 8346 - 12992 (-)
Type: CAZyme
Location: 8346 - 12992 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.