Cluster: HRGMv2_4234_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4234
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4234_26 | HRGMv2_4234_26_3 | 1342 | 2100 | - | 8.A.5.1.4 |
| NULL(UNKNOWN) | HRGMv2_4234_26 | HRGMv2_4234_26_4 | 2153 | 2302 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4234_26 | HRGMv2_4234_26_5 | 2336 | 3169 | - | 8.A.5.1.4 |
| TF | HRGMv2_4234_26 | HRGMv2_4234_26_6 | 3291 | 3734 | + | MerR |
| pfam | HRGMv2_4234_26 | HRGMv2_4234_26_7 | 3767 | 3976 | - | TTRAP |
| CAZyme | HRGMv2_4234_26 | HRGMv2_4234_26_8 | 4402 | 4920 | + | CE4 |
Gene ID: HRGMv2_4234_26_3
Type: TC
Location: 1342 - 2100 (-)
Type: TC
Location: 1342 - 2100 (-)
Gene ID: HRGMv2_4234_26_4
Type:
Location: 2153 - 2302 (-)
Type:
Location: 2153 - 2302 (-)
Gene ID: HRGMv2_4234_26_5
Type: TC
Location: 2336 - 3169 (-)
Type: TC
Location: 2336 - 3169 (-)
Gene ID: HRGMv2_4234_26_6
Type: TF
Location: 3291 - 3734 (+)
Type: TF
Location: 3291 - 3734 (+)
Gene ID: HRGMv2_4234_26_7
Type: pfam
Location: 3767 - 3976 (-)
Type: pfam
Location: 3767 - 3976 (-)
Gene ID: HRGMv2_4234_26_8
Type: CAZyme
Location: 4402 - 4920 (+)
Type: CAZyme
Location: 4402 - 4920 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.