Cluster: HRGMv2_4234_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4234
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4234_19 | HRGMv2_4234_19_16 | 18384 | 20009 | + | 2.A.35.2.1 |
| NULL(UNKNOWN) | HRGMv2_4234_19 | HRGMv2_4234_19_17 | 20350 | 21336 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | HRGMv2_4234_19 | HRGMv2_4234_19_18 | 21411 | 22385 | - | C59.951 |
| CAZyme | HRGMv2_4234_19 | HRGMv2_4234_19_19 | 22472 | 23203 | - | GT51 |
| pfam | HRGMv2_4234_19 | HRGMv2_4234_19_20 | 23240 | 25810 | - | FtsX | FtsX | MacB_PCD |
| TC | HRGMv2_4234_19 | HRGMv2_4234_19_21 | 25807 | 26496 | - | 3.A.1.125.1 |
Gene ID: HRGMv2_4234_19_16
Type: TC
Location: 18384 - 20009 (+)
Type: TC
Location: 18384 - 20009 (+)
Gene ID: HRGMv2_4234_19_17
Type:
Location: 20350 - 21336 (+)
Type:
Location: 20350 - 21336 (+)
Gene ID: HRGMv2_4234_19_18
Type: peptidase
Location: 21411 - 22385 (-)
Type: peptidase
Location: 21411 - 22385 (-)
Gene ID: HRGMv2_4234_19_19
Type: CAZyme
Location: 22472 - 23203 (-)
Type: CAZyme
Location: 22472 - 23203 (-)
Gene ID: HRGMv2_4234_19_20
Type: pfam
Location: 23240 - 25810 (-)
Type: pfam
Location: 23240 - 25810 (-)
Gene ID: HRGMv2_4234_19_21
Type: TC
Location: 25807 - 26496 (-)
Type: TC
Location: 25807 - 26496 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.