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Cluster: HRGMv2_4206_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4206_6 HRGMv2_4206_6_31 30285 32366 - 1.B.14.14.1
pfam HRGMv2_4206_6 HRGMv2_4206_6_32 32645 35149 + Topoisom_bac | Topoisom_bac | Toprim | Toprim_C_rpt | Toprim_C_rpt | Toprim_C_rpt | Toprim_C_rpt
NULL(UNKNOWN) HRGMv2_4206_6 HRGMv2_4206_6_33 35170 36282 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4206_6 HRGMv2_4206_6_34 36299 37060 + CE4
pfam HRGMv2_4206_6 HRGMv2_4206_6_35 37044 37850 + Formyl_trans_N
CAZyme HRGMv2_4206_6 HRGMv2_4206_6_36 37852 38844 + GT2
pfam HRGMv2_4206_6 HRGMv2_4206_6_37 38855 39985 + EpsG
TC HRGMv2_4206_6 HRGMv2_4206_6_38 39993 41111 + 9.B.146.1.4
TC HRGMv2_4206_6 HRGMv2_4206_6_39 41152 42030 + 1.B.18.3.3
TC HRGMv2_4206_6 HRGMv2_4206_6_40 42034 44541 + 8.A.3.3.4
Gene ID: HRGMv2_4206_6_31
Type: TC
Location: 30285 - 32366 (-)
Gene ID: HRGMv2_4206_6_32
Type: pfam
Location: 32645 - 35149 (+)
Gene ID: HRGMv2_4206_6_33
Type:
Location: 35170 - 36282 (+)
Gene ID: HRGMv2_4206_6_34
Type: CAZyme
Location: 36299 - 37060 (+)
Gene ID: HRGMv2_4206_6_35
Type: pfam
Location: 37044 - 37850 (+)
Gene ID: HRGMv2_4206_6_36
Type: CAZyme
Location: 37852 - 38844 (+)
Gene ID: HRGMv2_4206_6_37
Type: pfam
Location: 38855 - 39985 (+)
Gene ID: HRGMv2_4206_6_38
Type: TC
Location: 39993 - 41111 (+)
Gene ID: HRGMv2_4206_6_39
Type: TC
Location: 41152 - 42030 (+)
Gene ID: HRGMv2_4206_6_40
Type: TC
Location: 42034 - 44541 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Flavobacteriales
→
Family
Weeksellaceae
→
Genus
JABCPE02
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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