PROTEIN: HRGMv2_4206_6_33
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Protein File & Metadata
Source:
HRGMv2_4206_6_33.pdb
Genome ID:
Protein ID:
HRGMv2_4206_6_33
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Protein Sequence
MKYFAFFSYI LCKRMDLQDI FIKPEKISCE HWQLGNTISN EIQENGVVLI FCSDERGSGG 60 NAEVKDFSRL RKEFYALSAF DFEVPICDLG ELISGKTQAD TRYVLEEILT FCYNKNAVPI 120 VIGGSVDLSY ALFSALNFHQ KGINYAHISN VASLSNEGEE ISEANYLHKI LTKKEASLRN 180 FHLLGYQRHL NEIALLKLMK EVDFDVLRLA DMMNTTEKAE PFFRRADMVT LNCDAVESFS 240 EAFSTNPQVN GLNRREICAY MKEIGLSEDL KTFGVFNFNI HSESSLNHQL MAQMLWYLIE 300 GINIQRTHPK GRSYDTFVVL IDNREFSFKR DTFSGLWYFA KGNEVKKWIP CSREDYENAK 360 RGELNKRFLI 370
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q4D5Y5-F1-model_v4 | 27 | 310 | 1 | 306 | 0.7573 |
0.9052 |
| AF-Q4DSA0-F1-model_v4 | 27 | 310 | 1 | 306 | 0.7569 |
0.9052 |
| AF-Q8ZQR1-F1-model_v4 | 7 | 303 | 1 | 313 | 0.7483 |
0.8669 |
| AF-A0A0H3GQ60-F1-model_v4 | 15 | 305 | 1 | 318 | 0.7385 |
0.8792 |
| AF-Q9HZ59-F1-model_v4 | 15 | 300 | 1 | 311 | 0.7372 |
0.8821 |
| AF-Q2FVT2-F1-model_v4 | 17 | 303 | 1 | 311 | 0.7302 |
0.8709 |
| AF-Q32C02-F1-model_v4 | 15 | 308 | 3 | 306 | 0.7241 |
0.8381 |
| AF-A0A0H3H2T8-F1-model_v4 | 25 | 308 | 2 | 306 | 0.713 |
0.852 |
| AF-Q57757-F1-model_v4 | 26 | 303 | 5 | 284 | 0.7124 |
0.8369 |
| AF-K0EXI5-F1-model_v4 | 26 | 312 | 4 | 320 | 0.7123 |
0.8695 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4myn-assembly1.cif.gz_A | 29 | 306 | 1 | 298 | 0.7578 |
0.9097 |
| 2a0m-assembly1.cif.gz_A | 29 | 306 | 1 | 298 | 0.7575 |
0.9093 |
| 4mxr-assembly1.cif.gz_A | 30 | 306 | 1 | 297 | 0.757 |
0.9102 |
| 4myk-assembly1.cif.gz_A | 29 | 306 | 1 | 288 | 0.7477 |
0.8819 |
| 4myf-assembly1.cif.gz_A | 29 | 306 | 1 | 289 | 0.7472 |
0.8831 |
| 4myl-assembly1.cif.gz_A | 30 | 306 | 1 | 288 | 0.747 |
0.8843 |
| 3m1r-assembly1.cif.gz_D | 25 | 310 | 14 | 321 | 0.7211 |
0.8765 |
| 3m1r-assembly2.cif.gz_A | 25 | 310 | 12 | 318 | 0.7191 |
0.8703 |
| 1gq6-assembly1.cif.gz_C-2 | 25 | 306 | 5 | 292 | 0.7168 |
0.8434 |
| 3lhl-assembly1.cif.gz_A | 41 | 307 | 1 | 276 | 0.7151 |
0.8598 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P60109-F1-model_v4 | 18 | 306 | 1 | 309 | 0.7519 |
0.8873 |
| AF-Q8FQ76-F1-model_v4 | 7 | 306 | 2 | 314 | 0.7516 |
0.8643 |
| AF-A8AJ18-F1-model_v4 | 15 | 303 | 1 | 313 | 0.7509 |
0.892 |
| AF-C5DA16-F1-model_v4 | 17 | 311 | 1 | 324 | 0.7507 |
0.8911 |
| AF-B5QX59-F1-model_v4 | 10 | 303 | 1 | 313 | 0.7506 |
0.8778 |
| AF-Q0S7R0-F1-model_v4 | 6 | 310 | 1 | 319 | 0.7504 |
0.8573 |
| AF-Q9HQD7-F1-model_v4 | 17 | 303 | 1 | 306 | 0.7495 |
0.886 |
| AF-B4TQT3-F1-model_v4 | 7 | 305 | 1 | 313 | 0.7494 |
0.8625 |
| AF-Q8Z899-F1-model_v4 | 10 | 303 | 1 | 313 | 0.7488 |
0.8758 |
| AF-A4W8B2-F1-model_v4 | 15 | 303 | 1 | 312 | 0.7487 |
0.8886 |