Cluster: HRGMv2_4201_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4201
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4201_16 | HRGMv2_4201_16_19 | 17863 | 19134 | + | 4.A.3.2.2 |
| pfam | HRGMv2_4201_16 | HRGMv2_4201_16_20 | 19148 | 19483 | + | PTS_IIA |
| CAZyme | HRGMv2_4201_16 | HRGMv2_4201_16_21 | 19484 | 21028 | + | GH1 |
Gene ID: HRGMv2_4201_16_19
Type: TC
Location: 17863 - 19134 (+)
Type: TC
Location: 17863 - 19134 (+)
Gene ID: HRGMv2_4201_16_20
Type: pfam
Location: 19148 - 19483 (+)
Type: pfam
Location: 19148 - 19483 (+)
Gene ID: HRGMv2_4201_16_21
Type: CAZyme
Location: 19484 - 21028 (+)
Type: CAZyme
Location: 19484 - 21028 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.